Mass spectroscopy ppt free download as powerpoint presentation. Mass spectrometry can be used to determine the accurate molecular mass and structural features of an organic compound. Mass spectrometry overview mass spectrometry is an analytic technique that utilizes the degree of deflection of charged particles by a magnetic field to find the relative masses of molecular ions and. In mass spectrometry, fragmentation is the dissociation of energetically unstable molecular ions formed from passing the molecules in the ionization chamber.
The radical cation that is produced when an electron is knocked out of a neutral closedshell molecule in eims initially possesses a lot of energy. Mass spectrometry dont call it spectroscopy absorption of electromagnetic radiation electron impact mass spectrometry 70 ev 1614 kcalmol contrast with energy from ir 110 kcalmol or. Ion fragmentation of small molecules in mass spectrometry. In mass spectrometry separation of ions takes place on the basis of there mass to charge ratio. The results are typically presented as a mass spectrum, a plot of intensity as a function of the massto. Mass spectrometry is a powerful tool for the characterization of various biomolecules including nucleosides. Following are examples of compounds listed by functional group, which demonstrate patterns which can be seen in mass spectra of compounds ionized by electron impact ionization. Mass spectroscopy is an advanced and powerful technique for qualitative and quantitative analysis. Data system mass detector analyzer vacuum system source inlet region more precisely mass spectrometry determines the mass of a molecule. Pdfs available in description find your topic and download the pdf dsc dta tga thermoanalytical techn. The position of the carbonyl group influences the fragmentation pattern because the molecular ion fragments either side of the carbonyl group. Mass spectrometry and free radicals rutgers university. The fragmentation pattern contains clusters of peaks 14 mass units apart which represent loss of ch2nch3. Chapter 2 fragmentation and interpretation of spectra 2.
Pdf fragmentation pathways of six isolated and fused heterocyclic rings with dibromoquinazolinone moiety were investigated by electron impact mass. Mass spectrometry, isotopic fine structure, estimation of chemical rates. Fragmentation mechanisms in electron impact mass spectrometry. Mass spectroscopy mass spectroscopy is a technique causing the formation of the gaseous ions with or without fragmentation. Pdf mass spectrometric fragmentation of some isolated and. Pdf the fragmentation of unsubstituted and substituted. Fragment peaks other than the molecular ion peak is. A mass spectrometer generates multiple ions from the sample under investigation, it then separates them according to their specific masstocharge ratio mz, and then records the relative abundance. Some functional groups have characteristic fragmentation it is difficult to assign an entire structure based only on the mass spectra. Mass spectroscopy ppt mass spectrometry time of flight. The leading scientist in this field was fred mclafferty who together with frantisek turecek has written a very famous text book. Mass spectrometry for polymers benefits and analytical considerations for ms analysis of polymers the benefit of mass spectrometry is the ability to make absolute mass measurements at a. Introduction mass spectrometry ms is an analytical technique that measures the masstocharge particles. Molecular ion peaks are present, possibly with low intensity.
Introduction to ionization and fragmentation in mass spectrometry. These examples do not provide information about the fragmentation mechanisms that cause these patterns. The ionized molecule often fragments into smaller ionsradicals. The mass to charge ratio mz is used to describe ions observed in mass spectrometry. Which of the following peaks does not appear in the mass spectrum of hexane. As the name implies, it is actually two techniques that are combined to form a single. Spectroscopyspectroscopy mass spectroscopy mass spectroscopy is one of the primary spectroscopic methods for molecular analysis available to organic chemist. The radical cation that is produced when an electron is knocked out of a. Fragmentation of molecules under mass spectrometry. Infrared spectroscopy and mass spectrometry ionic species that are produced from methane by electron ejection and. Gas chromatographymass spectroscopy gcms is one of the socalled hyphenated analytical techniques. Lecture notes in eimass spectrometry by torben lund.
By convention, m is the numerical value for the mass of the ion and z is the numerical value for the charge of the ion. Mass spectrometry dont call it spectroscopy absorption of electromagnetic radiation electron impact mass spectrometry 70 ev 1614 kcalmol contrast with energy from ir 110 kcalmol or nmr 0. Computational and statistical methods for mass spectrometry data. Mass spectroscopy mass spectrometry is the study of systems generating the formation of gaseous ions, with or without fragmentation. The increase in sensitivity and resolution of the instrument has opened new. Ion source, ionization, desorption introduction an analytical technique which defines the chemical composition of compound or sample with reference to their mass to. Additional information can be found in mass spectrometry. Mass spectroscopy is a technique causing the formation of. Department of organic chemistry, imm, radboud university nijmegen. All sorts of fragmentations of the original molecular ion are possible and. The mass spectrum allows an experienced analyst to identify the compound or at a minimum narrow the possibilities down to a few compounds from the millions of.
Protein sequencing and identification with mass spectrometry. Mass spectroscopy is an analytical technique that identifies biomolecules or proteins present in biological samples and is also useful for studies on proteinprotein interactions. Mass spectrometry, also called mass spectroscopy, analytic technique by which chemical substances are identified by the sorting of gaseous ions in electric and magnetic fields according to. All books are in clear copy here, and all files are secure so dont worry about it. Metzger, university of oldenburg electron ionization and fragmentation of organic ions and interpretation of ei mass spectra, j. Mass spec fragmentation an extremely useful result of ei ionization in particular is a phenomenon known as fragmentation. Mass spectra can be quite complicated and interpretation difficult. Mass spectrometry and free radicals really radical cations when an organic molecule is ionized in an ms instrument, especially by ei, it generates a radical cation. Application of mass spectroscopy in pharmaceutical and. Mass spectrometry fragmentation patterns chemistry. Draw the ions corresponding to the other three peaks. Limbach, in encyclopedia of spectroscopy and spectrometry third edition, 2017. Introduction to mass spectrometry benefits of using mass spectrometry ionization techniques mass analyzer parameters for the agilent 6100 mass spectrometers tuning the mass. For the analytical chemist, a mass spectrum is useful for two applications.